Home » Publications from the ESD Team

Publications — Sorted by Year

In Press
von Mammen S, Phillips D, Jamniczky H, Hallgrimsson B, Jacob C. Swarm-based Computational Development. In: Doorsat R, Sayama H, Michel O, editors. Morphogenetic Engineering: Toward Programmable Complex Systems. New York: Springer; In Press. Abstract
Bhalla N, Bentley P, Jacob C. Evolving Physical Self-assembling Systems in Two Dimensions. In: 9th International Conference on Evolvable Systems - From Biology to Hardware. York, United Kingdom; In Press.
Bhalla N, Bentley P, Vize P, Jacob C. Programming and Evolving Physical Self-Assembling Systems in Three-Dimensions. Natural Computing. In Press. Abstract
2011
Jacob C, Sarpe V, Gingras C, Pajon Feyt R. Swarm-based Simulations for Immunobiology — What can agent-based models teach us about the immune system? In: Niiranen S, Ribeiro A, editors. Information Processing and Biological Systems. Vol 11. New York: Springer; 2011. (Intelligent Systems Reference Library; vol 11). Abstract
Shirazi AS, von Mammen S, Jacob C. Hierarchical Self-Organized Learning in Agent-Based Modeling of the MAPK Signaling Pathway. In: CEC 2011 - IEEE Congress on Evolutionary Computation. New Orleans, USA: IEEE Press; 2011. Abstract
Shirazi AS, von Mammen S, Yazdanbod I, Jacob C. Self-Organized Learning of Collective Behaviours in Agent-Based Simulations. In: Sayama H, Minai AA, Braha D, Bar-Yam Y, editors. ICCS 2011 - 8th International Conference on Complex Systems. Boston, MA, USA: NECSI Knowledge Press; 2011. Abstract
Bhalla N, Bentley P, Vice P, Jacob C. Staging the Self-Assembly Process Using Morphological Information. In: ECAL 2011 - 20th European Conference on Artificial Life. Paris, France; 2011.
Tsang H, Jacob C. RNADPCompare: An Algorithm for Comparing RNA Secondary Structures Based on Image Processing Techniques. In: CEC 2011 - IEEE Congress on Evolutionary Computation. New Orleans, USA: IEEE Press; 2011.
2010
Khemka N, Jacob C. VISPLORE: Exploring Particle Swarms by Visual Inspection. In: Sarker RA, Ray T, editors. Agent-based Evolutionary Search. New York: Springer; 2010.
Tsang H, Jiang T, Wiese K, Jacob C. A Study of RNA Secondary Prediction Using Different Mutation Operators. In: IEEE CEC 2010, Congress on Evolutionary Computation. Barcelona, Spain: Springer; 2010.
von Mammen S, Davison T, Baghi H, Jacob C. Component-Based Networking for Simulations in Medical Education. In: MediaWiN 2010: 5th IEEE Workshop on multiMedia Applications over Wireless Networks. Ricione, Italy; 2010.
Davison T, von Mammen S, Jacob C. EvoShelf: A System for Managing and Exploring Evolutionary Data. In: PPSN 2010 - 11th International Conference on Parallel Problem Solving from Nature. Krakow, Poland: Springer; 2010.
Shirazi AS, von Mammen S, Jacob C. Adaptive Modularization of the MAPK Signaling Pathway using the Multiagent Paradigm. In: Parallel Problem Solving from Nature. Krakow, Poland: Springer; 2010. Abstract
von Mammen S, Phillips D, Davison T, Jacob C. Swarm Graph Grammars: A Scale-independent, Graph-based Multi-agent Representation. In: ANTS 2010 - 7th International Conference on Swarm Intelligence. Brussels, Belgium; 2010. Abstract
Pilat M, Jacob C. Evolution of Vision Capabilities in Embodied Virtual Creatures. In: GECCO 2010: Genetic and Evolutionary Computation Conference. Portland, Oregon, USA; 2010.
Sarpe V, Esmaeili A, Yazdanbod I, Kubik T, Richter M, Jacob C. Parametric Evolution of a Bacterial Signalling System Formalized by Membrane Computing. In: IEEE CEC 2010: Congress on Evolutionary Computation. Barcelona, Spain: Springer; 2010.
von Mammen S, Wissmeier S, Wong T, Jacob C. Artistic Exploration of the Worlds of Digital Developmental Swarms. LEONARDO. 2010;(10).
2009
Kendon T, Chatfield-Reed K, Jacob C. Building with the beeoids: guided automatic construction using pheromones. In: GECCO.; 2009. p. 1747-8.
Moniz RD, Jacob C. Fractal Evolver: Interactive Evolutionary Design of Fractals with Grid Computing. In: EvoWorkshops.; 2009. p. 442-51.
Khemka N, Hushlak G, Jacob C. Interactive Evolutionary Evaluation through Spatial Partitioning of Fitness Zones. In: EvoWorkshops.; 2009. p. 432-41.