Group II Introns in Archaea

Clicking on the intron abbreviation in the "Name" column brings up full entries for individual introns that include intron and flanking sequence, ORF sequence, and intron RNA secondary structure. The table can be sorted by any of the column headings simply by clicking on the link at the top. In addition, the accession numbers are linked to the individual GenBank entries.
Note on nomenclature: Introns are named according to a species abbreviation and intron number. In cases where introns of the same (or almost identical) sequence have inserted in multiple genomic sites, or are reported in multiple GenBank entries, only one example is shown in the table. Hence the table is intended to be a listing of full-length, functional and unique introns in GenBank.
Note on host gene annotation: Host genes (i.e. exons) are assigned by a combination of manual and automatic processes, and so the assignments should be treated with caution.

>>Click for filter/download
Name Host Class RNA Type Domain GenBank
M.a.I1 Methanosarcina acetivorans CL1 IIB1 archaea AE011073.1:4279..6431
M.a.I5 Methanosarcina acetivorans Bacterial D IIB archaea AE011130.1:[2949..4823]
M.b.I1 Methanosarcina barkeri CL1 IIB1 archaea CP000099.1:2122631..2124795
M.m.I1 Methanosarcina mazei CL1 IIB1 archaea AE013515.1:3337..5483
Mc.b.I1 Methanococcoides burtonii CL1 IIB1 archaea CP000300.1:800706..803724
Me.hu.I1 Methanospirillum hungatei CL1 IIB1 archaea NC_007796.1:3055567..3057700
Me.hu.I2 Methanospirillum hungatei CL1 IIB1 archaea NC_007796.1:[1521394..1523527]
UA.I1 uncultured archaeon CL1 IIB1 archaea AY714843.1:21625..23730
UA.I10 uncultured archaeon Bacterial D IIB archaea FP565147.1:[502990..504827]
UA.I2 uncultured archaeon CL1 IIB archaea AY714849.1:[14494..16717]
UA.I3 uncultured archaeon Bacterial D IIB archaea AY714856.1:10054..11891
UA.I4 uncultured archaeon unclassified unclassified archaea AY714820.1:20258..22206
UA.I6 uncultured archaeon Bacterial E IIB archaea FP565147.1:2174430..2176370
UA.I7 uncultured archaeon Bacterial E IIB archaea FP565147.1:[1619711..1621720]
UA.I8 uncultured archaeon Bacterial E IIB archaea FP565147.1:2238167..2240107
UA.I9 uncultured archaeon CL1 IIB1 archaea FP565147.1:[2809849..2811954]