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Information for B.c.I8-1 intron  (Format of information for each intron

[Intron sequence]

[Intron and flanking sequence]

[ORF sequence]

[Secondary structure]

 

Note: Multiple Insertions

CP000040 Bacillus cereus E33L plasmid pE33L466 (5177-6005)

CP000040 Bacillus cereus E33L plasmid pE33L466 (133631-134354)

 

[Intron sequence]

 

Sequence from Genbank entry.  Intron is identified in red.  The ORF
is identified in blue with start and stop codons underlined.  

 

5' end

3001 gtgcgacacg tttctttata agtgtgcaaa cacgaagtag gagggttatc aatttgatga

3061 caacaacgga ttgactgcaa gtaggaatga aagccgtcag gttgagctga aactacttat

3121 ctgatactcc tatatgcaag gcgtgatagt agtcacaaat tgtatgaagc taggtgaagt

3181 cggctgaaca aaacctaagt gagaaatcat atggtaatgg ataggtcggg atgctacaaa

3241 acatctatgg tgagaatgtc ctaacggact ggcgaatgta caggtttaaa ggattaattc

3301 attagaaatg tgtatattgt caacgacgac gctatctacc gaaaagtaag agtaaataat

3361 atgaaattcg gaagatctaa cgatgaggat gtaaagataa caggcttaca gcaagcacct

3421 aaagatatat gtatagctaa gtcattcaga acgtggtaag caagagactg tcacaaatgc

3481 ctactaacag acaaggtgca tataaggttc taacgaacca aaattgcttt attcttgtga

3541 aggtggggac acagtaccga cgaagcatgt aacaaatgtg gagggatagt ccctagtctt

3601 gttcgttgaa aactaaatca actggatata actcacagga tcgagtaaga tgatgtgact

3661 tttcgtaaga aaagggaatg aatacgttgg tgagtacaac atggtttgta atctagttgt

3721 tttagtataa aaggataaga tggggcgctg tatgcgatga aagtcgcacg tacagtgtca

3781 agcgggggaa aagatggaga taactttaaa gtcttaccta tcgcaac                                       

3' end

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[Intron and flanking sequence]

 

2701 cgttaagtat tagcgaacat tcattttagg ggttatttta tatatcagtg cagtggacat

2761 aaaagaccaa ttttaaatat tgtgatatcc gctaatgata cttataggac attcctagtt

2821 aaatatgttc ttgatcattt tcacaaaatc gtattttgct gtttcgttat acgatttagg

2881 acaggttatg ccatatagat taatcgctta ctgggttggt ttacaaaaaa tagcaattgg

2941 acaattggaa aaaagtaaac ctgcagctga agcagtgact ttataacaaa gtagttattt

3001 gtgcgacacg tttctttata agtgtgcaaa cacgaagtag gagggttatc aatttgatga

3061 caacaacgga ttgactgcaa gtaggaatga aagccgtcag gttgagctga aactacttat

3121 ctgatactcc tatatgcaag gcgtgatagt agtcacaaat tgtatgaagc taggtgaagt

3181 cggctgaaca aaacctaagt gagaaatcat atggtaatgg ataggtcggg atgctacaaa

3241 acatctatgg tgagaatgtc ctaacggact ggcgaatgta caggtttaaa ggattaattc

3301 attagaaatg tgtatattgt caacgacgac gctatctacc gaaaagtaag agtaaataat

3361 atgaaattcg gaagatctaa cgatgaggat gtaaagataa caggcttaca gcaagcacct

3421 aaagatatat gtatagctaa gtcattcaga acgtggtaag caagagactg tcacaaatgc

3481 ctactaacag acaaggtgca tataaggttc taacgaacca aaattgcttt attcttgtga

3541 aggtggggac acagtaccga cgaagcatgt aacaaatgtg gagggatagt ccctagtctt

3601 gttcgttgaa aactaaatca actggatata actcacagga tcgagtaaga tgatgtgact

3661 tttcgtaaga aaagggaatg aatacgttgg tgagtacaac atggtttgta atctagttgt

3721 tttagtataa aaggataaga tggggcgctg tatgcgatga aagtcgcacg tacagtgtca

3781 agcgggggaa aagatggaga taactttaaa gtcttaccta tcgcaacgga taaaaagaat

3841 ccctgctagg caaggacagg gattctttgg tggaaattca ttgtattcaa aagaattcaa

3901 ccaatcgata ttatcatatt taaacaagaa aaggaactat ttcagcatta ttctgtttag

3961 atcatgctac aagataagaa atatacagtg aactactcgc cacttagcaa agcttgaagt

4021 gggagcttct cagttccgag acgaaagtaa cctttcgtct ccgtgagcgt tacttcgggg

4081 tgttccaccc ctagatgtcc aacgcatgga cgctcttttg gtacggttga tattttacgc

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[ORF sequence]

 

This intron is ORF-less.

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[Secondary structure]

                                                    

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