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Information of B.th.I2 intron (Format of information for each intron)
[Intron and flanking sequence]
Sequence from Genbank entry (intron is on the antisense strand).
The boundaries of the intron are marked as red and ORF is marked
as blue, with start and stop codons underlined.
Intron on antisense strand
3' end
ata gtgataggta
16921 agcctttgag attatctcca gcttttcccc cactccacac cgtacgcgcc cgtttccggg
16981 catacggcgt tccatcgttt ccaattgaaa gaaattgtta ccgttaagac tgttcgagta
17041 taaattgtca tacacttttt ttgtgtatca taatattcgt tatgtcttag cttggttttc
17101 tttaacatgg gctgtaacct ccttattact ttggagcatt acatctctta gtcttactcg
17161 aaaccatgtt aaccaatagt aaccttcaat cttcaatcga ctagtggcta tccctccacg
17221 ttcattacac gtttcatcgg tactgtgcca ccactttcac tgccgttaaa ccaagttata
17281 tcgacaacta atctcattgt gactttcctt ggcaacactt caaagagaac aagccctcca
17341 tgtcggcagc ttaccacgtt ccgtcattct tatctgtaca tacactttta ggtttcccct
17401 atgagcctgc taccttaata acgcctgtaa cgatatatgg gctttcataa aggagagttt
17461 tactcaccca cagtagcgac acttatttgt gtcagagaac ctttcgattc cctcccgata
17521 tagacccgta ccatcaggga ttcgtctgcg cttactagcg atcgcctcta gttcatcgcg
17581 catcctaacc ttgagtgttt tatagacctc cggtctatca gttacaccat ccaccgctgg
17641 atagctttcg tattagagat actaatttac ggtaaccttc aaccgacttc accgagcttc
17701 acacagttca gtacttgcct actttcctgc atgtcggagg attaagggaa gcccttccag
17761 acgttactcc ttcatttgac ttcttagaat gacagttcac tgctgaactg ttgagttcga
17821 cagtgcctaa gcttttcact taggaacgtg tcgcgc
5' end
Intron on sense strand
5' end
1 gcgcgacacg ttcctaagtg aaaagcttag gcactgtcga actcaacagt tcagcagtga
61 actgtcattc taagaagtca aatgaaggag taacgtctgg aagggcttcc cttaatcctc
121 cgacatgcag gaaagtaggc aagtactgaa ctgtgtgaag ctcggtgaag tcggttgaag
181 gttaccgtaa attagtatct ctaatacgaa agctatccag cggtggatgg tgtaactgat
241 agaccggagg tctataaaac actcaaggtt aggatgcgcg atgaactaga ggcgatcgct
301 agtaagcgca gacgaatccc tgatggtacg ggtctatatc gggagggaat cgaaaggttc
361 tctgacacaa ataagtgtcg ctactgtggg tgagtaaaac tctcctttat gaaagcccat
421 atatcgttac aggcgttatt aaggtagcag gctcataggg gaaacctaaa agtgtatgta
481 cagataagaa tgacggaacg tggtaagctg ccgacatgga gggcttgttc tctttgaagt
541 gttgccaagg aaagtcacaa tgagattagt tgtcgatata acttggttta acggcagtga
601 aagtggtggc acagtaccga tgaaacgtgt aatgaacgtg gagggatagc cactagtcga
661 ttgaagattg aaggttacta ttggttaaca tggtttcgag taagactaag agatgtaatg
721 ctccaaagta ataaggaggt tacagcccat gttaaagaaa accaagctaa gacataacga
781 atattatgat acacaaaaaa agtgtatgac aatttatact cgaacagtct taacggtaac
841 aatttctttc aattggaaac gatggaacgc cgtatgcccg gaaacgggcg cgtacggtgt
901 ggagtggggg aaaagctgga gataatctca aaggcttacc tatcactat
3' end
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[Intron and flanking sequence]
16261
cttatgaaac gataccgtta cacgtttatt caaaaatcgt tcatccaact gaaaaaatag
16321 gtttttagga aaacctactt gttttaaatc caagcttgat ttcgaggtca tttttgcaaa
16381 cattttatcc gcaaaagttt gtaacccttg attggctgtt gctagaatag acccctttgc
16441 tttttctcct gcaaagctag ttgatccata ctgcatcttt gcgacattac cttgcggtaa
16501 actcttaaaa tattcatcta atgcgctctt ttcggtaaaa tcatcaggtt tctctttata
16561 ataaaaagta cctaattcat tcagcatttg agatacattg tgcattgtaa tcttttcaat
16621 acagttattc ttcacacaat agtccacaat agcgagaata ataccgttaa tcgcattttg
16681 tgcagatgta ttaaagaatg cattatcacc agcatttggg ttgttataaa gagagaatgt
16741 taatgtattc gctcgtttag ccgcttcttg gtcatcgcca ttcacccatg catcaatgac
16801 taactgtaac gggttatacg acattccttg taagggttct gagatattca aaacttgaac
16861 atcataccca cgtttttcta atgtctcttt agatgcacta tacaattata
gtgataggta
16921 agcctttgag attatctcca gcttttcccc cactccacac cgtacgcgcc cgtttccggg
16981 catacggcgt tccatcgttt ccaattgaaa gaaattgtta ccgttaagac tgttcgagta
17041 taaattgtca tacacttttt ttgtgtatca taatattcgt tatgtcttag cttggttttc
17101 tttaacatgg gctgtaacct ccttattact ttggagcatt acatctctta gtcttactcg
17161 aaaccatgtt aaccaatagt aaccttcaat cttcaatcga ctagtggcta tccctccacg
17221 ttcattacac gtttcatcgg tactgtgcca ccactttcac tgccgttaaa ccaagttata
17281 tcgacaacta atctcattgt gactttcctt ggcaacactt caaagagaac aagccctcca
17341 tgtcggcagc ttaccacgtt ccgtcattct tatctgtaca tacactttta ggtttcccct
17401 atgagcctgc taccttaata acgcctgtaa cgatatatgg gctttcataa aggagagttt
17461 tactcaccca cagtagcgac acttatttgt gtcagagaac ctttcgattc cctcccgata
17521 tagacccgta ccatcaggga ttcgtctgcg cttactagcg atcgcctcta gttcatcgcg
17581 catcctaacc ttgagtgttt tatagacctc cggtctatca gttacaccat ccaccgctgg
17641 atagctttcg tattagagat actaatttac ggtaaccttc aaccgacttc accgagcttc
17701 acacagttca gtacttgcct actttcctgc atgtcggagg attaagggaa gcccttccag
17761 acgttactcc ttcatttgac ttcttagaat gacagttcac tgctgaactg ttgagttcga
17821 cagtgcctaa gcttttcact taggaacgtg tcgcgcctcc tttcggatca tttacaacca
17881 tacttgattg attttgtgct ctactcaaat tatcaatcat tggtacgaca atcgtttccc
17941 ctttacctga acgagaaacc cctagtattg ctgtattgac tgtatctgta tcgacataat
18001 atttgttctt ataatgtgat acaggaacac cgccataccc ctcaaacgct tccgtctttt
18061 cgggaatttc tctatactgt tcttgaattt cttcaattgt agtaaaacgg ctatccccct
18121 tttgaccata agctacattt tcgtcacttc gataattaac ctttgaatac accaaaaaac
18181 ccatcactgt agaagctaat aagccaaaca agtacatatt tgtaggcaga acaggaagaa
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This intron is ORF-less.
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