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Information of Th.e.I5 intron (Format of information for each intron)
[Intron and flanking sequence]
Sequence from Genbank entry (intron is on the antisense strand).
The boundaries of the intron are marked as red and ORF is marked
as blue, with start and stop codons underlined.
Intron on antisense strand
3' end
gtc gggtagcagg ggggcattgc tgccccctag ccccctagga
245821 accggacgtg caagtttccc tgcatccggc tcgagccccc caggacccct catttaagag
245881 gaaccggttg tgcatgcaac ctttacgata ctcatctaca gcctctctac cttttgagca
245941 ggttggtgac cgcaccagtg actcaagatc accgccattt gctttgtcac cattagggag
246001 gttctgtgag ttttctcgta actggggacc agtgggaagt ctgccctctt tcgagtggga
246061 tgatgttgga tgtcctgcca ccatcctcaa tccctatcca atccattaca gattggcatt
246121 cgctttttcc cacctccttt acccgcactt ccatgggtgt tccccgcggt ccacttgcct
246181 tgttcttagc ctatcaaggc gaaagtacgg gcttaccacg ttccgtttag atgacatatg
246241 aggggttagg tggtgactct gccccgacgg agctatcgtc ccccctcact gaagaacaaa
246301 cagtgagtcc tgtccgtttg ccattttggc ccaggcctat cagcgtcttt ggcctgtcta
246361 agatcacgag gcttctagcg tcacttcact tacgttcacc ataccctcaa gcctagctcc
246421 ctatcacctg acactggtga agttgcttcc tcctcacgga ttcggcttca accttacggt
246481 tcaggctacg ttgtcgggag ggcttcatac ctgaccgttg ccagtcacgc atgcctccct
246541 aggctacagc tgggggaaca gctggtctca ttctaacctt tcgggttagc gagacaatca
246601 tctggttagc tccacgtcgc
aac
5' end
Intron on sense strand
5' end
1 gttgcgacgt ggagctaacc agatgattgt ctcgctaacc cgaaaggtta gaatgagacc
61 agctgttccc ccagctgtag cctagggagg catgcgtgac tggcaacggt caggtatgaa
121 gccctcccga caacgtagcc tgaaccgtaa ggttgaagcc gaatccgtga ggaggaagca
181 acttcaccag tgtcaggtga tagggagcta ggcttgaggg tatggtgaac gtaagtgaag
241 tgacgctaga agcctcgtga tcttagacag gccaaagacg ctgataggcc tgggccaaaa
301 tggcaaacgg acaggactca ctgtttgttc ttcagtgagg ggggacgata gctccgtcgg
361 ggcagagtca ccacctaacc cctcatatgt catctaaacg gaacgtggta agcccgtact
421 ttcgccttga taggctaaga acaaggcaag tggaccgcgg ggaacaccca tggaagtgcg
481 ggtaaaggag gtgggaaaaa gcgaatgcca atctgtaatg gattggatag ggattgagga
541 tggtggcagg acatccaaca tcatcccact cgaaagaggg cagacttccc actggtcccc
601 agttacgaga aaactcacag aacctcccta atggtgacaa agcaaatggc ggtgatcttg
661 agtcactggt gcggtcacca acctgctcaa aaggtagaga ggctgtagat gagtatcgta
721 aaggttgcat gcacaaccgg ttcctcttaa atgaggggtc ctggggggct cgagccggat
781 gcagggaaac ttgcacgtcc ggttcctagg gggctagggg gcagcaatgc ccccctgcta
841 cccgac
3' end
[Intron and flanking sequence]
245161 ggagtgggct atgttctccg tgaagcctaa gttacgctgg ctgcttctgg gatgggtgac
245221 cttggggttc ctgctggggt gtcaaaacct cagccaaggg aatccggcaa ccccacctcc
245281 aatggttcgc ggcattccgc aatatctacc cattacggcc aaggcacgca ttcacgatac
245341 ctggattcaa ttggaagtgg cgcgatcgcc cgcccagcag cagttgggct tgatgtttcg
245401 tccgcaattg ccgagggatc gcggcatgct gtttccgctg tctccgcccc aggtggccag
245461 cttctggatg aaaaattgcc ttatccccct cgacttagtt tttctcagga acgggaaggt
245521 ggtggcgatc gcccccgaag tccccccttg ttcaactctc ccttgcccca cctatgagtc
245581 tggggttcct gtggatgctg ttcttgagct cgccggcggt cgtgctgcag aattgagact
245641 caaggtcaat gatcctgtag agatacagta cttggagcct tgaatgacgg tcaggggtac
245701 ttcgctccca aatacgattc caaagcagaa gtgttgaaag agagtttaag aagcgagaaa
245761 aaagggaaga aatgtcggtc gggtagcagg ggggcattgc tgccccctag ccccctagga
245821 accggacgtg caagtttccc tgcatccggc tcgagccccc caggacccct catttaagag
245881 gaaccggttg tgcatgcaac ctttacgata ctcatctaca gcctctctac cttttgagca
245941 ggttggtgac cgcaccagtg actcaagatc accgccattt gctttgtcac cattagggag
246001 gttctgtgag ttttctcgta actggggacc agtgggaagt ctgccctctt tcgagtggga
246061 tgatgttgga tgtcctgcca ccatcctcaa tccctatcca atccattaca gattggcatt
246121 cgctttttcc cacctccttt acccgcactt ccatgggtgt tccccgcggt ccacttgcct
246181 tgttcttagc ctatcaaggc gaaagtacgg gcttaccacg ttccgtttag atgacatatg
246241 aggggttagg tggtgactct gccccgacgg agctatcgtc ccccctcact gaagaacaaa
246301 cagtgagtcc tgtccgtttg ccattttggc ccaggcctat cagcgtcttt ggcctgtcta
246361 agatcacgag gcttctagcg tcacttcact tacgttcacc ataccctcaa gcctagctcc
246421 ctatcacctg acactggtga agttgcttcc tcctcacgga ttcggcttca accttacggt
246481 tcaggctacg ttgtcgggag ggcttcatac ctgaccgttg ccagtcacgc atgcctccct
246541 aggctacagc tgggggaaca gctggtctca ttctaacctt tcgggttagc gagacaatca
246601 tctggttagc tccacgtcgc aacagaagaa cctagccatc attgccgcag aacgggaagc
246661 ggctgaaaaa cgggtactgg agcaaaatgt tgtggaaatt gatgtctttc ggcggcagcg
246721 tcaagcggaa attgcccaac aggcagcgga actggaggcg gaagcaattc gcacccttgc
246781 ggcggccaac cgcgataaag cccttgctga ggcggcagga gtggaggcca tgctcgcggc
246841 ccaaaatgtg attagcaatg ctaacttgat agctcaagtg ataagagccc tctggccaga
246901 actggcaccc caactgccgc aagtgctcca agcccttgcc ccccaaccgg gggtgattgg
246961 cgatgccaaa atttatacct ttgccaatgg aggcggcacc gctgatttga ataaactgct
247021 cctgtccact agtgggttgg ccctgatcaa tgcccttttt gaggagggga aacttggcca
This intron is ORF-less.
Essentially the same as Th.e.I1, please see the structure of Th.e.I1.