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Information of Th.e.I6 intron  (Format of information for each intron)

[Intron sequence]

[Intron and flanking sequence]

[ORF sequence]

[Secondary structure]

[Intron sequence]

Sequence from Genbank entry.  Intron is identified in red.  The ORF
is identified in blue with start and stop codons underlined.  

5' end

                  gtgcgacgcg aaagctagcc agatgattgt cccactagcc caacaagcta
444181 gaacgggacc ggttgtgccc ccaaccgtag cctagggagg catgcgtgac tggtaacggt
444241 caggtatgaa gccctcccga caacgtagcc cgaaccgcaa ggttgaagcc gaatccgtga
444301 ggaggaagca acttcaccag cgtcaggtga tagggagcta ggcttgaggg tatggtgaac
444361 gtaagtgaag tgacgccaga agcctcgtta ctctcagcag gccaaagacg ctgacaggcc
444421 tgggccaaaa tggcaagtgg acggctacac ctctcctaat taggtgtacg gggacattag
444481 ctccaccggg gtaaagtcac cacctaaccc ctcgcgtcat ctggttggaa cgcggtaagc
444541 ccgtacttcc gccttgatag gccaagcaca aggcaagtgg actgcgagga acacccatgg
444601 aagtgcgggt agaggagacg ggaaaaagcg aatgctagcc tgtaatgggt tagataggga
444661 ttgagaatgc tggcaggaca ttcaacatca tcccactcga aagagggcag acttcccgtc
444721 ggttccccat tacgagaaaa tctatagaac ctccctaatg gtgacaaagc agtgcgacgc
444781 gaaagctagc cagatgattg tcccactagc ccaacaagct agaacgggac cggttgttcc
444841 cccaaccgta gcctaaggag gcatgcgtga ctggtaacgg tcaggtatga agccctcccg
444901 acaatgaagc ccgaaccgga aggttggagc cgaatccgtg aggaggaagc aacttcacca
444961 gcgtcaggtg atagggagct aggcttgagg gtatggtgaa cgcaagtgaa gtgacgctag
445021 aagcctcgtt actccaagca ggccaaagat gctgataggc ctgagccaaa atggcaaagc
445081 ggattggatt cactgcttgc ttttcagtga acggggacag caactccgcc ggggtatagt
445141 caccacctaa cccctcgtgt catctggttg gaacgcggta agcccgtatc ttcgccttga
445201 acattcaagg caggcaaacc gtaaggaatg ctgatggggg tgcgggtaga ggaggtggga
445261 aaaagcgaat gctagcctgt aatgggctag atagggattg agaatgctgg caggacattc
445321 aacatcatcc cactcgaaag agggcagact tcccgccggt ccccccttac gagaaagtct
445381 atagaacctt cctaatggtg acaatgcaaa tggcggtgat cttgagtcac tggtgcggtc
445441 accaacctgc tcaaaaggta gagaggctgt agatgagtat cgtaaaggtt gcatgcacaa
445501 ccggttcctc ttaaatgagg ggtcctgggg ggctcgagcc ggatgcgggg aaacttgcac
445561 gtccggttcc tagggggcta gggggcagcg atgcccccct gctacccgac aatggcggtg
445621 accttgagtc actggtgcgg tcaccaaccc tcccaccaag ggtaggcagg ctgtagatga
445681 gtatcgtaaa ggttgtacac acaaccggtt cctcttaaat gaggggtttt ggggggcctg
445741 agccggatgc gaggaaactt gcacgtccgg ttcttagggg gctagggggc agtaatgccc
445801 ccctgctacc cgac

3' end

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[Intron and flanking sequence]

443881 cagcgaacta tctaaaggat gaacaaacta gaatcgggag ttgagcgcag gataacagcg
443941 gatggtgagt ggtttccatg agtaacaatg gccaatggat gaggtccaaa tgcgtactgc
444001 taaaggctga cgattggtag gggcaatttc ctgcaacaaa agtttctgca gagaaggggc
444061 gcgatcgccc ccatggatta aagggagcaa acagaaccca aagattccag agataataga
444121 gataattagg gtgcgacgcg aaagctagcc agatgattgt cccactagcc caacaagcta
444181 gaacgggacc ggttgtgccc ccaaccgtag cctagggagg catgcgtgac tggtaacggt
444241 caggtatgaa gccctcccga caacgtagcc cgaaccgcaa ggttgaagcc gaatccgtga
444301 ggaggaagca acttcaccag cgtcaggtga tagggagcta ggcttgaggg tatggtgaac
444361 gtaagtgaag tgacgccaga agcctcgtta ctctcagcag gccaaagacg ctgacaggcc
444421 tgggccaaaa tggcaagtgg acggctacac ctctcctaat taggtgtacg gggacattag
444481 ctccaccggg gtaaagtcac cacctaaccc ctcgcgtcat ctggttggaa cgcggtaagc
444541 ccgtacttcc gccttgatag gccaagcaca aggcaagtgg actgcgagga acacccatgg
444601 aagtgcgggt agaggagacg ggaaaaagcg aatgctagcc tgtaatgggt tagataggga
444661 ttgagaatgc tggcaggaca ttcaacatca tcccactcga aagagggcag acttcccgtc
444721 ggttccccat tacgagaaaa tctatagaac ctccctaatg gtgacaaagc agtgcgacgc
444781 gaaagctagc cagatgattg tcccactagc ccaacaagct agaacgggac cggttgttcc
444841 cccaaccgta gcctaaggag gcatgcgtga ctggtaacgg tcaggtatga agccctcccg
444901 acaatgaagc ccgaaccgga aggttggagc cgaatccgtg aggaggaagc aacttcacca
444961 gcgtcaggtg atagggagct aggcttgagg gtatggtgaa cgcaagtgaa gtgacgctag
445021 aagcctcgtt actccaagca ggccaaagat gctgataggc ctgagccaaa atggcaaagc
445081 ggattggatt cactgcttgc ttttcagtga acggggacag caactccgcc ggggtatagt
445141 caccacctaa cccctcgtgt catctggttg gaacgcggta agcccgtatc ttcgccttga
445201 acattcaagg caggcaaacc gtaaggaatg ctgatggggg tgcgggtaga ggaggtggga
445261 aaaagcgaat gctagcctgt aatgggctag atagggattg agaatgctgg caggacattc
445321 aacatcatcc cactcgaaag agggcagact tcccgccggt ccccccttac gagaaagtct
445381 atagaacctt cctaatggtg acaatgcaaa tggcggtgat cttgagtcac tggtgcggtc
445441 accaacctgc tcaaaaggta gagaggctgt agatgagtat cgtaaaggtt gcatgcacaa
445501 ccggttcctc ttaaatgagg ggtcctgggg ggctcgagcc ggatgcgggg aaacttgcac
445561 gtccggttcc tagggggcta gggggcagcg atgcccccct gctacccgac aatggcggtg
445621 accttgagtc actggtgcgg tcaccaaccc tcccaccaag ggtaggcagg ctgtagatga
445681 gtatcgtaaa ggttgtacac acaaccggtt cctcttaaat gaggggtttt ggggggcctg
445741 agccggatgc gaggaaactt gcacgtccgg ttcttagggg gctagggggc agtaatgccc
445801 ccctgctacc cgactaactt aggagtaaca accaagcaac gtcagccttg cctgcttgga
445861 atctcgccag ccaatttccc tccgaggcaa catatgtcag aaccccaccg cgacaccaag
445921 attggccaag tgctcatgaa ccggtatcag ctcacggagt taattggcaa aggctcaatg
445981 gggcgggtct atcgcgcaga agatattctc cttgggggtg ttcccgttgc cgttaaattc
446041 ctgtcgcaaa ccctgctcaa cgatcgcatg aaaacccgct ttgcccaaga ggcgcgggcg
446101 ggtgcgctcc ttggccagaa aagtatgcac gtggtgcggg tgctcgacta cggcatgaat

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[ORF sequence]

This intron is ORF-less. 

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[Secondary structure]

Essentially the same as Th.e.I1, please see the structure of Th.e.I1.

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