[Back to introns by organism]   [Back to home page]

Information of M.a.I4-3 intron  (Format of information for each intron)

[Intron sequence]

[Intron and flanking sequence]

[ORF sequence]

[Secondary structure]

Note: Multiple insertions

M.a.I4-1        AE010882(4828-5781)

M.a.I4-3        AE010996(801-1555)

[Intron sequence]

Sequence from Genbank entry.  Intron is identified in red.  The ORF
is identified in blue with start and stop codons underlined.  

5' end

                           gtgcgacaag aagttatgtc atgaattgct aagatgctgc
841  cctttccatt tggggtaacc ctaccagaat gtgcgtcatc agtaatgatg gggtgcagag
901  cttctgggac aatgtgagaa cctctgaaaa tccagttcag ataatttgct agggtaagag
961  ttccatgggg aacgtaaagt taaccatcgt aagagtcgta aagtacggca agcgaaattg
1021 gattgatacg cttggaccaa aatggtacga aatcaggctt taacggttgg catgacgttc
1081 aagcaaatgg acaaacggtt tccggcttat agatggcccc taaagaaccc ataattattc
1141 atgacataga acttggtaag ccctatttgt tcccttcaaa agggtagaaa cttcgtaagg
1201 agcaacaacg acaaagaggg tagaggattc agtaaaaagc gaatgccaat ctttaatgga
1261 ttggataggg gttcaaactt tgccctgatc cgaaaggatg cagacttact gatggtgttt
1321 tcttgtgtga acggaaacaa actcacgaat gtaagatact caaagacacc agtaggtgag
1381 aggcttacag acattaatgt tagtgggctg ttatccagaa tcacaaaatc agttatgcaa
1441 aataactgat gcctgataca gaaagggttt gaaaacactc gagccgtatg aagggaaact
1501 ttcacgtacg gttcctgggg gagaaaggag gagtaatcct cccgacttac ccgac

3' end  

[top]

[Intron and flanking sequence]

301  ctgttatttc aactgacggt aaggttatca atcagcattt tggaaaagca tcccgttttt
361  acatatttga gatcggcgag ggcaaaatcc aattcctgga agtaagagag tgcacacctc
421  tatgcggctc ggcagattac gggaatccgg aggaggtttt gaataaaaca atttctgtga
481  ttttagactg tgaagcttta ctgtgcgcca ggatcgggag caagccgcag gaagaattaa
541  ggaaaaaagg gatcgaacca atagaagctc catatttgat tgatgaagct ttaaacaata
601  tccttaccgg tgaataaaca gagagtctaa acagagtccc gaattttcca tccataatgc
661  atttattttg catgaaatct ccatcacgcc tggttccgga aggtttcgtg ggcagtcctg
721  caacctatag tggatgtaag atcaaaaaga agtacaatca ttgtagattt tttcatactc
781  acattatgta caatcatacc gtgcgacaag aagttatgtc atgaattgct aagatgctgc
841  cctttccatt tggggtaacc ctaccagaat gtgcgtcatc agtaatgatg gggtgcagag
901  cttctgggac aatgtgagaa cctctgaaaa tccagttcag ataatttgct agggtaagag
961  ttccatgggg aacgtaaagt taaccatcgt aagagtcgta aagtacggca agcgaaattg
1021 gattgatacg cttggaccaa aatggtacga aatcaggctt taacggttgg catgacgttc
1081 aagcaaatgg acaaacggtt tccggcttat agatggcccc taaagaaccc ataattattc
1141 atgacataga acttggtaag ccctatttgt tcccttcaaa agggtagaaa cttcgtaagg
1201 agcaacaacg acaaagaggg tagaggattc agtaaaaagc gaatgccaat ctttaatgga
1261 ttggataggg gttcaaactt tgccctgatc cgaaaggatg cagacttact gatggtgttt
1321 tcttgtgtga acggaaacaa actcacgaat gtaagatact caaagacacc agtaggtgag
1381 aggcttacag acattaatgt tagtgggctg ttatccagaa tcacaaaatc agttatgcaa
1441 aataactgat gcctgataca gaaagggttt gaaaacactc gagccgtatg aagggaaact
1501 ttcacgtacg gttcctgggg gagaaaggag gagtaatcct cccgacttac ccgacacaaa
1561 ttaaacttga agataatgag gcaaatttcc ttcataactt tgtaagaaaa gggcataaaa
1621 atgcaagaga actaactcga gccagtatcc tccttctatc aaaccagcaa aaaggagtta
1681 ctgagataac agaaacatta gatgtttcta ggaatactac tttgaatata aggaaaagat
1741 accttgaaga aggtcttcca agtgctcttt cggataaacc aagatctggt caatctgtaa
1801 aatatactga aaaacatgtt gcagaagtaa tcgctttagc ctgcagcagt tctcctgatg
1861 gaagcaagag atggtctctc tccctgctta ctgaagaact aaggaaaaaa gaaggattta
1921 aaacaatagg aaaagagagt gtcaggctta ttttgaaaaa agcaaaacta aaccttggtt

[top]

[ORF sequence]

This intron is ORF-less.

top]

[Secondary structure]

[top]