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Information of M.a.I6-1 intron (Format of information for each intron)
[Intron and flanking sequence]
Note: Multiple insertions
M.a.I6-1 AE010299 (4030024-4030645)
M.a.I6-2 AE010299 (2118880-2119498)
M.a.I6.3 AE010299 (4143574-4144192)
Sequence from Genbank entry (intron is on the antisense strand).
The boundaries of the intron are marked as red and ORF is marked
as blue, with start and stop codons underlined.
Intron on antisense strand
3' end
gg
5881 taagtagccc aggggaattt cacccccagg ccctctcaga tccgtacttg aatctctcga
5941 ttcatacggc tcccattatc cagccataaa gccttgtttt gtccattggt tcctcccttg
6001 aagacaaggt tgaccgcagt tcaaaactgg ataatacaat cccttcgctc catgcccatt
6061 acaggcactt catcactact acgaattgtt ccgcccctgt tcatcgcatc gatacttttg
6121 tccttgcggg tccaccgctt ggaggtttct ctttacatcg atgagcaggt tcccacgttc
6181 cacagaaaag cacgagttaa gttcccgcca cctatatacc ggtcaccatc tggtcagtaa
6241 acagagtatc ttccagactt atcccaggtt agtcacgcca cctggttttg acgacatcat
6301 cgcgttttcg atacgtcttc agtggttcat tttcattcgg ctccttaacc cacacctgac
6361 gaagtcatag cctcgccttt tcccataatg ctcactaccg tggcttttga ccaaagcagc
6421 ttatgggtgg tttggaataa cttcctgtaa agcgagtccg aggggtctac cctcatcttt
6481 tctgcagcct cgtggcacac
5' end
Intron on sense strand
5' end
1 gtgtgccacg aggctgcaga aaagatgagg gtagacccct cggactcgct ttacaggaag
61 ttattccaaa ccacccataa gctgctttgg tcaaaagcca cggtagtgag cattatggga
121 aaaggcgagg ctatgacttc gtcaggtgtg ggttaaggag ccgaatgaaa atgaaccact
181 gaagacgtat cgaaaacgcg atgatgtcgt caaaaccagg tggcgtgact aacctgggat
241 aagtctggaa gatactctgt ttactgacca gatggtgacc ggtatatagg tggcgggaac
301 ttaactcgtg cttttctgtg gaacgtggga acctgctcat cgatgtaaag agaaacctcc
361 aagcggtgga cccgcaagga caaaagtatc gatgcgatga acaggggcgg aacaattcgt
421 agtagtgatg aagtgcctgt aatgggcatg gagcgaaggg attgtattat ccagttttga
481 actgcggtca accttgtctt caagggagga accaatggac aaaacaaggc tttatggctg
541 gataatggga gccgtatgaa tcgagagatt caagtacgga tctgagaggg cctgggggtg
601 aaattcccct gggctactta cc
3' end
[Intron and flanking sequence]
5041 aattgtgggt ttacctcgat ttctaaaaaa cgcacatgaa attcccgaat tacaggcaca
5101 aaaaatgaaa gtaccccgga actttcatgc caaattattg attgcttcgt ggaatagatt
5161 actttccttt tgtggcaaga attaaaatca aattgcggac ggccacccta ccttaaaagg
5221 tagggtatgc ttcgggtcat ccgccgattt ctggggaagt tagaaatcgg ttagtttcaa
5281 ttgtccagat ttctttattc tattagatct aatctctttt tttggttttc cttgggattc
5341 gttaatataa tgcctgattg tgtcagcagt tacattccca attgatctat agaacttgcc
5401 acttgaccat aaacttccac cccagtattt ttcccttaat taaggatgaa gcttaaataa
5461 tctgtaagaa cttcctcctt ttaggtgttg aattaccttg gatagtgagg tgcttggatg
5521 gaattccaca aacaagtgca catgatcttc tactacttcc atggcatgta ttctatagcc
5581 tttctcagta caaatgtttt tgaggattga cgcaatcctt tttaactttc ttgttgtaga
5641 atattttgaa tctgtactta ggcgccaata cgatgtggta ggtggtctga ccatagccat
5701 ggctaaaact acgcaattcc aatgcttatc acatcctagc cataggtggc tgcaaacccc
5761 tgtggctatg gtgtcaaaaa acattatatt gaaaaaagta acgattttag atttttaagg
5821 tgtatatcga aaaacctgcg agggttcact tcatcccaga cttgaaagtc tgggcattgg
5881 taagtagccc aggggaattt cacccccagg ccctctcaga tccgtacttg aatctctcga
5941 ttcatacggc tcccattatc cagccataaa gccttgtttt gtccattggt tcctcccttg
6001 aagacaaggt tgaccgcagt tcaaaactgg ataatacaat cccttcgctc catgcccatt
6061 acaggcactt catcactact acgaattgtt ccgcccctgt tcatcgcatc gatacttttg
6121 tccttgcggg tccaccgctt ggaggtttct ctttacatcg atgagcaggt tcccacgttc
6181 cacagaaaag cacgagttaa gttcccgcca cctatatacc ggtcaccatc tggtcagtaa
6241 acagagtatc ttccagactt atcccaggtt agtcacgcca cctggttttg acgacatcat
6301 cgcgttttcg atacgtcttc agtggttcat tttcattcgg ctccttaacc cacacctgac
6361 gaagtcatag cctcgccttt tcccataatg ctcactaccg tggcttttga ccaaagcagc
6421 ttatgggtgg tttggaataa cttcctgtaa agcgagtccg aggggtctac cctcatcttt
6481 tctgcagcct cgtggcacac catgaccctc cgcgctccta tagcagtaaa aaatgtattg
6541 aaaatttgat acaatcaagc aaacaggcaa acctcttaca tgcagtatga aatctgttta
6601 attcaactgt ttttatgttg ataaattcga ttaatttata atgtttaaaa atatacacaa
6661 aattgtaggt cttaaatgaa tatgtgagtg tttttcgaaa tagaattaaa acagataata
6721 ataaaaaatt agagtttatt ggataaatca caagtctaat cttaattaca gatataatgc
6781 acaatacttg cacagtaatg cagacaacaa ttttgtcatt tttcaaatta aaaatataat
6841 tatgttatca atattaaaaa tatgattatg ttatcaatat taaaaatatt atattatttt
This intron is ORF-less.