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Information of M.a.I6-3 intron  (Format of information for each intron)

[Intron sequence]

[Intron and flanking sequence]

[ORF sequence]

[Secondary structure]

Note: Multiple insertions

M.a.I6-1        AE010299 (4030024-4030645)

M.a.I6-2        AE010299 (2118880-2119498)

M.a.I6.3        AE010299 (4143574-4144192)

[Intron sequence]

Sequence from Genbank entry (intron is on the antisense strand). 

The boundaries of the intron are marked as red and ORF is marked 

as blue, with start and stop codons underlined.

Intron on antisense strand

3' end

  1 ggtaagtagc ccaggggaat ttcaccccca ggccctctca gatccgtacg tgaatctctc 

 61 gattcatacg gctcccatta tccagccata aagccttgtt ttgtccattg gttcctccct 

121 tgaagacaag gttgaccgcg gttcaaaact ggataataca atcccttcgc ttcatgccca 

181 ttacaggcac ttcatcacta ctacgaattg ttccgcccct gttcatcgca tcgatacttt 

241 tgtccttgcg ggtccaccgc ttggaggttt ctctttacat cgatgagcag gttcccacgt 

301 tccacagaaa agcacgagtt aagttcccgc cacctatata ccggtcacca tctggtcagt 

361 aaacagagta tcttccagac ttatcccagg ttagtcacgc cacctgttga cgacatcatc 

421 gcgttttcga tacgtcttca gtggttcatt ttcattcggc tccttaaccc acacctgacg 

481 aagtcatagc ctcgcctttt cccataatgc tcactaccgt ggcttttgac caaagcagct 

541 tatgggtggt ttggaatcac ttcctgtaaa gcgagtccga ggggtctacc ctcatctttt 

601 ctgcagcctc gtggcacac

5' end 

Intron on sense strand 

5' end  

  1 gtgtgccacg aggctgcaga aaagatgagg gtagacccct cggactcgct ttacaggaag 

 61 tgattccaaa ccacccataa gctgctttgg tcaaaagcca cggtagtgag cattatggga 

121 aaaggcgagg ctatgacttc gtcaggtgtg ggttaaggag ccgaatgaaa atgaaccact 

181 gaagacgtat cgaaaacgcg atgatgtcgt caacaggtgg cgtgactaac ctgggataag 

241 tctggaagat actctgttta ctgaccagat ggtgaccggt atataggtgg cgggaactta 

301 actcgtgctt ttctgtggaa cgtgggaacc tgctcatcga tgtaaagaga aacctccaag 

361 cggtggaccc gcaaggacaa aagtatcgat gcgatgaaca ggggcggaac aattcgtagt 

421 agtgatgaag tgcctgtaat gggcatgaag cgaagggatt gtattatcca gttttgaacc 

481 gcggtcaacc ttgtcttcaa gggaggaacc aatggacaaa acaaggcttt atggctggat 

541 aatgggagcc gtatgaatcg agagattcac gtacggatct gagagggcct gggggtgaaa 

601 ttcccctggg ctacttacc

3' end  

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[Intron and flanking sequence]

   1 gtagaattaa ctttagtttt gagacggcct gtttagagaa tttttaacca gaggattgaa 

  61 atcagtcaga aatgaattta atttggtgtg tacagcagtt aacttaaaga aaatatggat 

 121 ttactcaaat aaaaacgaga tcaatagaaa gataaatgga ataaatggaa cttttcactt 

 181 taagacttga gtaataagga atagaaaaca aatctcataa aaaagttcca atttatcagc 

 241 agacgatatt attttattac taacagtaat tgtcggacag cctttgaagg acggggtatt 

 301 ggtaagtagc ccaggggaat ttcaccccca ggccctctca gatccgtacg tgaatctctc 

 361 gattcatacg gctcccatta tccagccata aagccttgtt ttgtccattg gttcctccct 

 421 tgaagacaag gttgaccgcg gttcaaaact ggataataca atcccttcgc ttcatgccca 

 481 ttacaggcac ttcatcacta ctacgaattg ttccgcccct gttcatcgca tcgatacttt 

 541 tgtccttgcg ggtccaccgc ttggaggttt ctctttacat cgatgagcag gttcccacgt 

 601 tccacagaaa agcacgagtt aagttcccgc cacctatata ccggtcacca tctggtcagt 

 661 aaacagagta tcttccagac ttatcccagg ttagtcacgc cacctgttga cgacatcatc 

 721 gcgttttcga tacgtcttca gtggttcatt ttcattcggc tccttaaccc acacctgacg 

 781 aagtcatagc ctcgcctttt cccataatgc tcactaccgt ggcttttgac caaagcagct

 841 tatgggtggt ttggaatcac ttcctgtaaa gcgagtccga ggggtctacc ctcatctttt 

 901 ctgcagcctc gtggcacacc atgaccctcc gcgctcccat tgtaataaag aaggaagggg 

 961 tttaaaaaac tcttccaact ggcgctcatt atggttaata gtcccttggt aataccgtga 

1021 aattagtacc cataccccac ggatttggcc acgtacacca ggttccccac acaaatgcga

1081 aataggggaa ctcggaggcg gaatgatcct tcaggtcaat tccagtctgg gaataactaa 

1141 tgttccacgt gcttagattg cccccatcgc tgacatacgt tttccaccat acataaccac 

1201 cttctgaatc attgtttcc

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[ORF sequence]

This intron is ORF-less.

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[Secondary structure]

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