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Information of Th.e.I4-1 intron  (Format of information for each intron)

[Intron sequence]

[Intron and flanking sequence]

[ORF sequence]

[Secondary structure]

Note: Multiple Insertions
Th.e.I4-1    BA000039 (219750-220594)
Th.e.I4-2    BA000039 (2466031-2465187)
Th.e.I4-3    BA000039 (1040548-1041392)

[Intron sequence]

Sequence from Genbank entry.  Intron is identified in red.  The ORF
is identified in blue with start and stop codons underlined.  

5' end

   1 gtgcgacgcg aaagctagcc agatgattgt cccactagcc caacaagcta gaacgggacc 

 61 ggttgtgccc ccaaccgtag cctagggagg catgcgtgac tggtaacggt caggtatgaa 

121 gccctcccga caacgtagcc cgaaccgcaa ggttgaagcc gaatccgtga ggaggaagca 

181 acttcaccag cgtcaggtga tagggagcta ggcttgaggg tatggtgaac gtaagtgaag 

241 tgacgccaga agcctcgtta ctctcagcag gccaaagacg ctgacaggcc tgggccaaaa 

301 tggcaagtgg acggctacac ctctcctaat taggtgtacg gggacattag ctccaccggg 

361 gtaaagtcac cacctaaccc ctcgcgtcat ctggttggaa cgcggtaagc ccgtacttcc 

421 gccttgatag gccaagcaca aggcaagtgg actgcgagga acacccatgg aagtgcgggt 

481 agaggagacg ggaaaaagcg aatgctagcc tgtaatgggt tagataggga ttgagaatgc 

541 tggcaggaca ttcaacatca tcccactcga aagagggcag acttcccgtc ggttccccat 

601 tacgagaaaa tctatagaac ctccctaatg gtgacaaagc aaatggcggt gaccttgagt 

661 cactggtgcg gtcaccaacc ctcccaccaa gggtaggcag gctgtagatg agtatcgtaa 

721 aggttgtaca cacaaccggt tcctcttaaa tgaggggttt tggggggcct gagccggatg 

781 cgaggaaact tgcacgtccg gttcttaggg ggctaggggg cagtaatgcc cccctgctac 

841 ccgac

3' end  

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[Intron and flanking sequence]

   1 aactattata gcctggtgta acaatatcaa cgtttacgcc gactggggac gccacaaccg 

  61 gtagacaagc tgcctgatac tgaatcagct tatagccgca tttgacgcgc tcccctggtg 

 121 cgtcaggtaa aagcatgatc caatgtctaa cgcagccagt tcggaggctt ctgttttttc 

 181 agcccaaggg caaggttcaa atggcgtatc cacgagttgg ccacgacgcg ccccaatagc 

 241 cacacagcga ataggatagt gggtacttat agctattcca ataaagaatg agacattagg  

 301 gtgcgacgcg aaagctagcc agatgattgt cccactagcc caacaagcta gaacgggacc 

 361 ggttgtgccc ccaaccgtag cctagggagg catgcgtgac tggtaacggt caggtatgaa 

 421 gccctcccga caacgtagcc cgaaccgcaa ggttgaagcc gaatccgtga ggaggaagca 

 481 acttcaccag cgtcaggtga tagggagcta ggcttgaggg tatggtgaac gtaagtgaag 

 541 tgacgccaga agcctcgtta ctctcagcag gccaaagacg ctgacaggcc tgggccaaaa 

 601 tggcaagtgg acggctacac ctctcctaat taggtgtacg gggacattag ctccaccggg 

 661 gtaaagtcac cacctaaccc ctcgcgtcat ctggttggaa cgcggtaagc ccgtacttcc 

 721 gccttgatag gccaagcaca aggcaagtgg actgcgagga acacccatgg aagtgcgggt 

 781 agaggagacg ggaaaaagcg aatgctagcc tgtaatgggt tagataggga ttgagaatgc 

 841 tggcaggaca ttcaacatca tcccactcga aagagggcag acttcccgtc ggttccccat 

 901 tacgagaaaa tctatagaac ctccctaatg gtgacaaagc aaatggcggt gaccttgagt 

 961 cactggtgcg gtcaccaacc ctcccaccaa gggtaggcag gctgtagatg agtatcgtaa 

1021 aggttgtaca cacaaccggt tcctcttaaa tgaggggttt tggggggcct gagccggatg 

1081 cgaggaaact tgcacgtccg gttcttaggg ggctaggggg cagtaatgcc cccctgctac 

1141 ccgactggcc ttgcgttcgt cctcgatgat tggcggagcc agtgtcctca atattgtggt 

1201 gggcctgctg cgcatgaagg cggcggcagt gctgctgcaa gacatgttgg ggacagcatt 

1261 cggcatcacc ggtttgggcg tgggcaatgt ccagatcact ccagatcact gctgcgaacg 

1321 cggaagatgg gagtgaagcc gttggcactc tttgcggcac gctggggctt gcagtcctca 

1381 acgctctttt ttagggagct tcagcgagtg tattgcggtg ctcgtaatga tccgaatcag 

1441 gcggg

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[ORF sequence]

This intron is ORF-less.

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[Secondary structure]

Essentially the same as Th.e.I1, please see the structure of Th.e.I1.

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