List of Chloroplast Group II introns by Organism
Clicking on the intron name in the "Species" column brings up full information for individual introns, including intron sequence, GenBank annotation, flanking sequence, ORF sequence and intron RNA structure. Other links in the Table provide additional information.
This is not meant to be a complete list of known chloroplast introns and only ORF-containing introns are shown.
Researchers are referred to GOBASE for further information on organellar introns.
| Species | Organism Class | Host gene | Intron | ORF domains | Size (aa) | ORF fused with upstream exon? | Genbank |
|---|---|---|---|---|---|---|---|
| Nicotiana tabacum | Plant | trnK | I1 | RT(5-7)-X | 509 | No | NC_001879 |
| Marchantia polymorpha | Plant | trnK | I1 | RT(5-7)-X | 370 | No | X04465 |
| Scenedesmus obliquus | Green Algae | petD | I1 | RT-X-Zn | 608 | No | P19593 |
| Oocystacea sp. | Green Algae | petD | I1 | RT-X-Zn | 608 | No | S05341 |
| Bryopsis maxima | Green Algae | rbcL | I1 | RT-X | 478 | No | X55877 |
| Pyrenomonas salina | Green Algae | cpn60 | I1 | RT-X | 452 | No | X81356 |
| Euglena gracilis | Euglenoid | psbC | I4 | RT-X | 458 | No | X70810 |
| Euglena gracilis | Euglenoid | psbD | I8 | RT-X | 506 | No | X70810 |
| Euglena deces | Euglenoid | psbC | I4 | RT-X | 453 | No | Z99833 |
| Euglena myxocylindracea | Euglenoid | psbC | I4 | RT-X | 436 | No | Z99835 |
| Euglena viridis | Euglenoid | psbC | I4 | RT-X | 468 | No | Z99836 |
| Lepocinclis buetschlii | Euglenoid | psbC | I4 | RT-X | 451 | No | Z99834 |